Monday, August 29, 2011

New Microscope Might See Beneath Skin In 4-D

A new type of laser scanning confocal microscope (LSCM) holds the promise of diagnosing skin cancer in a single snapshot. 

Typical LSCMs take 3-D images of thick tissue samples by visualizing thin slices within that tissue one layer at a time. Sometimes scientists supplement these microscopes with spectrographs, which are devices that measure the pattern of wavelengths, or "colors," in the light reflected off of a piece of tissue. This pattern of wavelengths acts like a fingerprint, which scientists can use to identify a particular substance within the sample. But the range of wavelengths used so far with these devices has been narrow, limiting their uses. 

Not so with the new microscope developed by physicists from the Consiglio Nazionale delle Ricerche (CNR) in Rome, and described in a paper accepted to the AIP's new journal AIP Advances. Unlike other combination "confocal microscope plus spectrograph" devices, the new machine is able to gather the spectrographic information from every point in a sample, at a wide range of wavelengths, and in a single scan. To achieve this, the authors illuminate the sample with multiple colors of laser light at once – a sort of "laser rainbow" – that includes visible light as well as infrared. 

This allows scientists to gather a full range of information about the wavelengths of light reflected off of every point within the sample. Using this method, the researchers took high-resolution pictures of the edge of a silicon wafer and of metallic letters painted onto a piece of silicon less than half a millimeter wide. 

They also demonstrated that it is possible to apply this technique to a tissue sample (in this case, chicken skin) without destroying it. With further testing, the researchers say the microscope could be used to detect early signs of melanoma; until then, it may be useful for non-medical applications, such as inspecting the surface of semiconductors.

Contacts and sources:
Article: "Supercontinuum ultra wide range confocal microscope for reflectance spectroscopy of living matter and material science surfaces" is published in AIP Advances.

Authors: Stefano Selci (1), Francesca R. Bertani (1), and Luisa Ferrari (1).

(1) Instituto dei Sistemi Complessi, Consiglio Nazionale delle Ricerche, Rome

Its Official, Laughter Is Medicine: Laughter Has A Positive Impact On Vascular Function

Watching a funny movie or sitcom that produces laughter has a positive effect on vascular function and is opposite to that observed after watching a movie that causes mental stress according to research conducted at the University of Maryland School of Medicine in Baltimore, Maryland.

"The idea to study positive emotions, such as laughter came about after studies had shown that mental stress caused blood vessels to constrict", says Dr. Michael Miller, Professor of Medicine and lead investigator.

In their initial study more than 10 years ago, 300 men and women with or without heart disease completed a questionnaire related to situational-humor. For example, if you went to a party and saw someone wearing the same clothes as you, on a scale of 1 to 5 (ranging from not funny at all to very funny) how would you respond? The volunteers with heart disease were 40% less likely to find these situations funny. Even though this study was unable to prove whether a humorous response to situations in daily life may protect against heart disease, (or the lack of such a response is more common after a heart attack), it led to the next series of studies testing whether laughter may directly affect vessel function.

In this manner, volunteers watched segments of a funny movie, such as "There's something about Mary" on one day and on another day watched the opening segment of the stressful movie "Saving Private Ryan". Each volunteer served as his or her own control.

When study volunteers watched the stressful movie, their blood vessel lining developed a potentially unhealthy response called vasoconstriction, reducing blood flow. This finding confirms previous studies, which suggested there was a link between mental stress and the narrowing of blood vessels. However, after watching the funny movie, the blood vessel lining expanded.

Overall, more than 300 measurements were made with a 30-50% difference in blood vessel diameter between the laughter (blood vessel expansion) and mental stress (blood vessel constriction) phases. “The magnitude of change we saw in the endothelium after laughing was consistent and similar to the benefit we might see with aerobic exercise or statin use” says Dr. Miller.

The endothelium has a powerful effect on blood vessel tone and regulates blood flow, adjusts coagulation and blood thickening, and produces chemicals in response to injury and inflammation. It also plays an important role in the development of cardiovascular disease.

“The endothelium is the first line in the development of atherosclerosis or hardening of the arteries, so it is very possible that laughing on a regular basis may be useful to incorporate as part of an overall healthy lifestyle to prevent heart disease. In other words, eat your veggies, exercise and get a good belly laugh every day" says Dr. Miller.

Although the results of the brachial artery blood flow measurements appear to make a connection between laughter and vascular health, more studies are needed. "What we really need is a randomized clinical trial to determine whether positive emotions reduce cardiovascular events above and beyond today's standard of care therapies", concluded Dr. Miller.

Contacts and sources:
Jacqueline Partarrieu
European Society of Cardiology

Anger Is Toxic For Heart Along With Other Negative Emotions Say Researchers

Anger and stress are linked to a negative prognosis in patients with myocardial infarction, according to the results of a ten-year study carried out by the Institute of Clinical Physiology (IFC) in Pisa, Italy.

There is a growing awareness that psychological factors play a major role in triggering and modulating the progression of ischemic heart disease. Negative emotions such as hostility, anger, depression, anxiety and social isolation are cardio-toxic, whereas positive feelings characterized by imagination, empathy, and spiritual interests are cardio-protective. A type D (for Distress) personality is described as someone with the tendency to live negative emotions and experience strong inhibitions to express them, and has been associated with a special vulnerability to ischemic heart disease.

Doctor Franco Bonaguidi, researcher and psychologist in a multidisciplinary team of cardiologists and epidemiologists at the IFC Institute, specialising in cardiovascular disease said: “For a long time I have been interested in the important, but still largely elusive, relationship between personality traits, negative emotions and prognosis in cardiology. This is important in the group of patients recovering from an acute myocardial infarction, who have a special vulnerability (since they are at higher risk compared to patients with stable coronary artery disease). The good news is that these patients have the opportunity to change their behaviour, since they have recently experienced a life-threatening condition (such as acute myocardial infarction) which often leads people to reassess the whole of life balance and priorities. This is a suitable time for psychological intervention and behavioural therapy, when needed”.

The overall aim of the study was to assess whether personality traits and, in particular anger-prone behavioural responses, may affect prognosis in patients who survived an acute myocardial infarction.

A total of 228 patients hospitalised in 13 Coronary Care Units of northern and central Italy from 1990 to 1995, with the diagnosis of acute myocardial infarction (AMI) were included in the study. Before their discharge, patients underwent a psychological evaluation by using Cattell’s Sixteen Personality Factors Questionnaire and Psy Inventory. Cattell’s questionnaire assesses secondary factors obtained from a factorial analysis of raw scores of 16 primary factors (Extraversion, Anxiety, Sensitivity, Self-control). The PSY inventory measures 6 psychological traits, only in part covered by the profile of type A personality (Responsibility, Energy, Obsessive behaviour, Anger, stress-related disturbances and time urgency).

After discharge the patients entered a programme of clinical follow-up for ten years, during which 51 cardiac events were recorded. To understand which factors were able to predict these events the authors used a statistical analysis known as the Cox model.

Examining factors such as the age of patient, gender, psychological variables, clinical data (traditional risk factors, peak cardiac necrosis enzymes, left ventricular wall motion score index and heart rate variability), the results show that the only factors able to predict cardiac events in patients are the Anger and Stress-related disturbances, with a relative risk of 2.30 and 1.90 respectively. Patients who had reported a high score on the Anger scale had a higher risk of experiencing a new event, 2.30 times superior in comparison with those who had reported a low score on the same scale.

Expressing the results in terms of infarction-free survival with the Kaplan-Meier method ten years after infarction, the patients with high score of anger show a significantly lower ( 57,4%) infarction-free survival in comparison with the other set (78.5%).


The results of our study confirm the results of other important studies. Actually a recent meta-analysis of 25 studies of Chida and Steptoe (J Am Coll Cardiol. 2009) shows that anger and hostility are associated with coronary heart disease outcomes both in healthy and coronary heart disease population.

Anger is a recognized predictor of adverse outcome in patients with cardiovascular disease and can be specifically characterized by tailored questionnaires. Anger is a primitive emotion which cannot be switched off at will. It can have a constructive function when it serves to overcome obstacles and reach certain objectives. Beyond a certain level, or in presence of underlying vulnerability due to genetic or environmental factors, anger can trigger unfavourable hemodynamic, neural and endocrine changes through excessive sympathetic activation and can chronically contribute to self-destructive life habits, food and alcoholic addiction.

Anger becomes destructive when it is impotent, manifesting itself in grievance, resentment, irritability and frustration. At times, anger masks sorrow, a deeper and more painful emotion. Acknowledgement of inner states of mind can lead to psychological and spiritual growth which has a beneficial impact on spiritual well-being. As Shakespeare writes: "Give sorrow words; the grief that does not speak, whispers the over- fraught heart and bids it break" (Macbeth, act IV, scene III).

These results suggest the necessity of a multidimensional therapeutic approach which includes not only physical and pharmacological therapy, but also psychotherapy treatment targeted not only on anger but also toward a deeper suffering, of which anger is often an expression.

Contacts and sources:
Author: Doctor Bonaguidi, Franco (Pisa, Italy)

Foods Rich In Protein, Dairy Products Help Dieters Preserve Muscle And Lose Belly Fat: Study

New research suggests a higher-protein, lower-carbohydrate energy-restricted diet has a major positive impact on body composition, trimming belly fat and increasing lean muscle, particularly when the proteins come from dairy products.

The study, published in the September issue of the Journal of Nutrition, compared three groups of overweight and obese, but otherwise healthy, premenopausal women. Each consumed either low, medium or high amounts of dairy foods coupled with higher or lower amounts of protein and carbohydrates.

The women exercised seven days per week for four months, a routine that included five days of aerobic exercise and two days of circuit weightlifting.

According to the researchers, there were identical total weight losses among the groups, but the higher-protein, high-dairy group experienced greater whole-body fat and abdomen fat losses, greater lean mass gains and greater increases in strength.

The tissue composition, exclusively fat, of the weight the women lost has profound implications for longer-term health, say the researchers.

"One hundred per cent of the weight lost in the higher-protein, high-dairy group was fat. And the participants gained muscle mass, which is a major change in body composition," says Andrea Josse, lead author of the study and a graduate student in the Department of Kinesiology at McMaster University. "The preservation or even gain of muscle is very important for maintaining metabolic rate and preventing weight regain, which can be major problem for many seeking to lose weight."

Researchers found the lower-protein, low-dairy group lost about a pound and half of muscle whereas the lower-protein, medium dairy group lost almost no muscle. In marked contrast, the higher-protein, high-dairy group actually gained a pound and half of muscle, representing a three-pound difference between the low- and high-dairy groups.

On top of the muscle mass differences, the higher-protein, high-dairy group lost twice as much belly fat than the lower-protein, low-dairy group.

"Fat in the abdomen is thought to be especially bad for cardiovascular and metabolic health, and it seems—according to what we found in this study—increasing calcium and protein in the diet may help to further promote loss of fat from the worst storage area in the body," says Josse.

"A very important point is that these changes were not captured by simple measures of body weight or body mass index, which are the most commonly used measures of dietary 'success'" adds Stuart Phillips, a professor in the Department of Kinesiology. "These women also got fitter and stronger, which greatly reduces their risk of disease."

The I.D.E.A.L. (Improving Diet Exercise and Lifestyle) for Women study was funded by Dairy Farmers of Canada, the US Dairy Research Institute and Canadian Institutes of Health Research. Agropur Incorporated provided the dairy products used in the study.

Contacts and sources:
Stuart Phillips
McMaster University

Video clips of Stuart Phillips and Andrea Josse discussing the findings can be found at:http://www.youtube.com/watch?v=G4B-35-lwCc

A copy of the study can be found on the Journal of Nutrition's website at http://jn.nutrition.org/content/141/9/1626.full

'The Dish' Finds A 'Diamond Planet' Orbiting Pulsar

Astronomers using 'The Dish' – CSIRO's radio telescope near Parkes, NSW – believe they've found a small planet made of diamond, orbiting an unusual star.

An artist's visualisation of the pulsar and its orbiting planet. 
An artist's visualisation of the pulsar and its orbiting planet. (Swinburne Astronomy Productions)
Credit: Swinburne Astronomy Productions

The discovery was made by an international research team, led by Professor Matthew Bailes of Swinburne University of Technology in Melbourne, Australia, and is reported today in the journal Science.

"Although bizarre, this planet is evidence that we've got the right understanding of how these binary systems evolve," said Dr Michael Keith of CSIRO Astronomy and Space Science, one of the research team members.

The researchers, from Australia, Germany, Italy, the UK and the USA, first found an unusual star called a pulsar, now named PSR J1719-1438, using the 64-m Parkes radio telescope in eastern Australia.

Pulsars are small spinning stars about 20 km in diameter – the size of a small city – that emit a beam of radio waves. As the star spins and the radio beam sweeps repeatedly over Earth, radio telescopes detect a regular pattern of radio pulses.

The researchers followed up their discovery with the Lovell radio telescope in the UK and one of the Keck telescopes in Hawaii, and noticed that the arrival times of the pulsar's pulses were systematically altered – in a way that must be caused by the gravitational pull of a small planet orbiting the pulsar.

The modulations of the radio pulses reveal several things about the planet.

First, it orbits the pulsar in just two hours and ten minutes, and the distance between the two objects is 600,000 km – a little less than the radius of our Sun.

Second, the companion must be small, less than 60,000 km (that's about five times the Earth's diameter). The planet is so close to the pulsar that, if it were any bigger, it would be ripped apart by the pulsar's gravity.

But despite its small size, the planet has slightly more mass than Jupiter.

"This high density of the planet provides a clue to its origin," Professor Bailes said.

The team thinks that the 'diamond planet' is all that remains of a once-massive star, most of whose matter was siphoned off towards the pulsar.

But pulsar J1719-1438 and its companion are so close together that the companion can only be a very stripped-down 'white dwarf' star, one that has lost its outer layers and over 99.9 per cent of its original mass.

"This remnant is likely to be largely carbon and oxygen, because a star made of lighter elements like hydrogen and helium would be too big to fit the measured orbit," said CSIRO's Dr Keith.

The density means that this material is certain to be crystalline – that is, a large part of the star may be similar to a diamond.

The pulsar and its planet lie 4,000 light-years away in the constellation of Serpens (the Snake). The system is about an eighth of the way towards the Galactic Centre from the Earth.

Contacts and sources:
Helen Sim
CSIRO Australia

Death From Above: Parasite Wasps Attacking Ants From The Air Filmed For The First Time

Flight attacks of small parasitoid wasps (no larger than 2.0 mm in size) on ant workers have been filmed by José María Gómez Durán from Madrid. The four species of wasps show amazing adaptations and enormous differences in the tactics they use. 

Females of the parasitoid wasp Kollasmosoma sentum oviposit in workers of the ant Cataglyphis ibericus.
Credit: José María Gómez Durán

Two of the four filmed species are new to science and are described by Dr Kees van Achterberg from NCB Naturalis Leiden. The study was published in the open access journal ZooKeys.

A female parasitoid wasp of Kollasmosoma sentum new species attacks an ant worker of Cataglyphis ibericus; all in 0.05 seconds.
Credit: José María Gómez Durán

Ants are a very dominant group in nature and well-equipped to defend themselves. Only a few small parasitoids manage to break through their defence, thanks to very different and amazing adaptations. The four filmed species belong to four different genera and two different families of wasps (Braconidaeand Ichneumonidae). 

Females of the parasitoid wasp Neoneurus vesculus oviposit in workers of the ant Formica cunicularia.
Credit: José María Gómez Durán

The eggs of the Braconidae develop inside adult ants. The eggs of the Ichneumonidae, however, develop in the larvae of ants. How the newly developed young wasps manage to survive inside the ant nest is still unknown. One of the possible explanations is that dead ants may be deposited outside the entrance of the ant nest, thus giving the young wasps a chance to emerge, avoiding a lethal attack on themselves.


Here are links to four movies from Pensoft's YouTube channel:
Parasitoid wasp (Hybrizon buccatus) ovipositing in ants (Lasius grandis)
Parasitoid wasp (Elasmosoma luxemburgense) ovipositing in ants (Formica rufibarbis)
Parasitoid wasp (Neoneurus vesculus) ovipositing in ants (Formica cunicularia)
Parasitoid wasp (Kollasmosoma sentum) ovipositing in ants (Cataglyphis ibericus)

Citation: Durán JMG, van Achterberg C (2011) Oviposition behaviour of four ant parasitoids (Hymenoptera, Braconidae, Euphorinae, Neoneurini and Ichneumonidae, Hybrizontinae), with the description of three new European species. ZooKeys 125: 59-106. doi: 10.3897/zookeys.125.1754

Lots Of Chocolate Protects Heart, Reduces Cardiac Disease Risk By A Third

High levels of chocolate consumption might be associated with a one third reduction in the risk of developing heart disease, finds a study published on bmj.com today.

The findings confirm results of existing studies that generally agree on a potential beneficial link between chocolate consumption and heart health. However, the authors stress that further studies are needed to test whether chocolate actually causes this reduction or if it can be explained by some other unmeasured (confounding) factor.

File:Chocolate.jpg
Credit: Wikipedia

The findings were presented at the European Society of Cardiology Congress in Paris at 10:10 hrs (Paris time) / 09:10 hrs (UK time) on Monday 29 August 2011.

The World Health Organisation predicts that by 2030, nearly 23.6 million people will die from heart disease. However, lifestyle and diet are key factors in preventing heart disease, says the paper.

A number of recent studies have shown that eating chocolate has a positive influence on human health due to its antioxidant and anti-inflammatory properties. This includes reducing blood pressure and improving insulin sensitivity (a stage in the development of diabetes).

However, the evidence about how eating chocolate affects your heart still remains unclear. So, Dr Oscar Franco and colleagues from the University of Cambridge carried out a large scale review of the existing evidence to evaluate the effects of eating chocolate on cardiovascular events like heart attack and stroke.

They analysed the results of seven studies, involving over 100,000 participants with and without existing heart disease. For each study, they compared the group with the highest chocolate consumption against the group with the lowest consumption. Differences in study design and quality were also taken into account to minimise bias.

Five studies reported a beneficial link between higher levels of chocolate consumption and the risk of cardiovascular events. They found that the "highest levels of chocolate consumption were associated with a 37% reduction in cardiovascular disease and a 29% reduction in stroke compared with lowest levels." No significant reduction was found in relation to heart failure.

The studies did not differentiate between dark or milk chocolate and included consumption of chocolate bars, drinks, biscuits and desserts.

The authors say the findings need to be interpreted with caution, in particular because commercially available chocolate is very calorific (around 500 calories for every 100 grams) and eating too much of it could lead to weight gain, risk of diabetes and heart disease.

However, they conclude that given the health benefits of eating chocolate, initiatives to reduce the current fat and sugar content in most chocolate products should be explored.

Contacts and sources:
Emma Dickinson
BMJ-British Medical Journal

Sunday, August 28, 2011

"Smelling" The Heart Failure, Evaluation Of An Electronic Nose

A German team has developed a completely new non-invasive method to identify heart failure. It consists of an "electronic nose" which could make the "smelling" of heart failure possible. The projet was presented at the ESC Congress 2011 today. “The early detection of chronic heart failure (CHF) through periodical screening facilitates early treatment application” said investigator Vasileios Kechagias from the University Hospital Jena.

Heart failure is a common, costly, disabling and potentially deadly condition. In developed countries, around 2% of adults suffer from heart failure, but in those over the age of 65, this increases to 6–10%. Mostly due to costs of hospitalisation, it is associated with high health expenditure. Heart failure is associated with significantly reduced physical and mental health, resulting in a markedly decreased quality of life. Although some people survive many years, progressive disease is associated with an overall increased mortality and morbidity.

“We conducted a daily screening of patients with different degrees of heart failure. For the study, eligible patients were enrolled after informed consent, and the collected data was anonymous. Measurements were made in collaboration with the University of Applied Sciences, Jena. The participating physicians of the Department of Internal Medicine I, University Hospital of Jena, were responsible for patient recruitment and analysis of clinical data,” explained Kechagias.

In particular, the relevant laboratory parameters for heart failure (BNP, minerals, creatinine, blood gas analysis) were collected and a clinical assessment of heart failure based on the available parameters (clinical history, laboratory, echocardiography, and exercise stress test) was performed. In 2010, we screened a total of 250 patients and included 126 in the clinical study. In the course of the study, testing was optimized through a standardized skin preparation.

The assignment of patients to the different groups (no heart failure vs moderate heart failure vs decompensated heart failure) was performed by physicians blinded for the measured values through the electronic nose.

Two groups were formed with CHF patients: one with decompensated (n=27) heart failure and one with compensated (n=25) heart failure. As clinical manifestation of the decompensated heart failure investigators evaluated the marked limitation of any activity where the patient is comfortable only at rest (Class III) or the state in which any physical activity brings on discomfort and symptoms occur at rest (Class IV). Furthermore they screened a control group of patients without heart failure symptoms (n=28). Then the measurement with the "electronic nose" randomly took place, from 10 cycles of 3 min. each and a subsequent offline-data-analysis.

The “electronic nose” system consists of an array of three thick-film metal oxide based gas sensors with heater elements. Each of the sensors has a slightly different sensitivity to various odorant molecular types. Interactions between molecules and the sensor are caused by reactions with oxygen on the heated sensor surface leading to a change of the free charge carrier concentrations and thus to a change in conductivity in the metal oxide layer. The odour components are divided by a statistical analysis into two principal components.

Credit: European Society of Cardiology (ESC)

In all patients, data acquisition was possible. The patients with decompensated heart failure could be divided from compensated heart failure with 89% sensitivity and 88% specificity. Cardiovascular drug use was not different in these groups. On the other hand, patients without heart failure (control group) were different from the patients with heart failure in the principal-component analysis (89% sensitivity and 84% specificity).

Further work is in progress to identify the responsible components.

Our primary objective is to create and establish a minimal invasive method, which will help to rapidly screen, diagnose, group and monitor the CHF.

Source: European Society of Cardiology (ESC)

Giant Underground River 'Rio Hamza' Discovered 4km Beneath The Amazon

A giant hidden river flows beneath the jungles of Brazil.

A river hidden underground has surfaced. Scientists estimate a subterranean river, called Rio Hamza, may be 6,000km long and hundreds of times wider than the Amazon

The territory in Brazil has 20% of freshwater on the planet, but apparently, this number may be even greater. According to the State agency, Researchers at the National Observatory (ON) found evidence of an underground river of 6,000 km in length, which runs down the Amazon River, at a depth of 4000 meters.

The two streams still have the same flow direction, ie from west to east, but its features are quite different.Brazilian scientists have discovered the existence of an underground river about 6,000 kilometers long running 4,000 meters deep below the Amazon River.

The discovery is the result of a decade of investigations conducted between 1970 and 1980 involving the drilling of 241 wells along the Amazon basin in search of hydrocarbons, gas and oil, conducted by the Brazilian Oil Company Petrobras in collaboration with the Department of Geophysics of the National Observatory and the Amazonas Federal University.

The underground river runs about 4,000 meters deep in a course similar to the Amazon River and has a caudal estimated at about 3,000 cubic meters per second. This flow represents about 2 percent of the volume carried by the Amazon River which is estimated at 133,000 cubic meters of water per second. The Amazon River, considered the world's longest and largest river (highest water flow), has its headwaters near Arequipa in Perú and runs for about 6,990 kilometers to empty in the Atlantic Ocean at a broad estuary about 240 kilometres wide in the far north of Brazil.

Representation of Underground Hamza River
Credit: Department of Geophysics of the National Observatory and the Amazonas Federal University.

The researchers decided to name the underground river as Hamza, a tribute to the scientist of Indian origin Mannathal Valiya Hamza, living in Brazil since 1974, who has dedicated about 40 years of his life to the study of Brazilian rivers and collaborated in the discovery of this underground river, said the newspaper O Estado de Sao Paulo.(in Portuguese).

The results of this research were presented last week in Rio de Janeiro at the 12th Congress of the Brazilian Geophysical Society.

The discovery was made possible by information provided by Petrobras for operation for oil.Through the data, scientists Valiya Hamza, the Department of Geophysics of the National Observatory, and Professor Elizabeth Tavares Pimentel, Federal University of Amazonas, identified the movement of groundwater at depths of up to 4000 meters.

Mouths of the Amazon


Image: Wikipedia

The case was further developed in the doctoral professor Elizabeth, under the guidance of Hamza. The work was presented last week at the 12th International Congress of Brazilian Geophysical Society, in Rio de Janeiro.

The groundwater flow has only 2% of the Amazon River, but has increased the flow of the Rio Sao Francisco, Minas Gerais and the Northeast and cut benefits 13 million people. Hamza The width of the river varies from 200 to 400 miles, but its waters run very slowly, because there is a tunnel through which flow freely Possani. Gradually, they overcome resistance of sediments that act as a giant sponge, the liquid moves through the pores of the rock toward the sea.

Sources of the Amazon

Image: Wikipedia

It is interesting to recall that two years ago, Italian scientists have discovered an underground river that runs beneath Rome, longer than the Tiber - the third largest in Italy, with 392 km. Like Brazil, the Italian underground river found thanks to data from drilling for oil.

In Brazil, another reserve of groundwater is the Guarani Aquifer, with 45 million liters. Most is in Brazil, but it also extends into Paraguay, Uruguay and Argentina. (ED

Source: http://www.on.br/conteudo/modelo.php?endereco=noticias/historico/historico.php


Major Advance On Building Much-Needed Tissues And Organs

With stem cells so fickle and indecisive that they make Shakespeare’s Hamlet pale by comparison, scientists today described an advance in encouraging stem cells to make decisions about their fate. The technology for doing so, reported here at the 242nd National Meeting & Exposition of the American Chemical Society (ACS), is an advance toward using stem cells in “regenerative medicine” — to grow from scratch organs for transplants and tissues for treating diseases.

“Stem cells have great potential in regenerative medicine, in developing new drugs and in advancing biomedical research,” said Laura L. Kiessling, Ph.D., who presented the report. “To exploit that potential, we need two things: first, reproducible methods to grow human stem cells in the laboratory, and second, the ability to make stem cells grow into heart cells, brain cells or whatever kind of cell. Our technology takes a different approach to both of these problems, and the results are very encouraging.”

Biologically, so-called pluripotent human embryonic stem cells have not made up their minds about what to become. That’s essential because these cells, which are derived from embryos, have the agility to develop into the hundreds of different kinds of cells in a fully-formed human body. But controlling their differentiation has also stood as a major barrier to making the stem cell dream come true and using these all-purpose cells in medicine.
Cells growing on surfaces with different materials on them are shown in colored squares. Thechemical structures represent the molecules on the cells that bind to the surfaces.
Credit: Laura L. Kiessling, Ph.D.

Past approaches to growing and scripting the fate of stem cells have involved adding growth-regulating and other substances to cultures of stem cells growing in the laboratory. These conditions left scientists guessing about exactly what wound up in the stem cells. Kiessling and colleagues are pioneering a new approach that involves using chemically controlled surfaces.

Kiessling previously developed chemically modified plastic and glass surfaces that take much of the guess work out of growing stem cells in laboratory cultures. In the past, scientists grew stem cells on surfaces that contained mouse cells. That left scientists with nagging questions about possible contamination of stem cells with disease-causing animal viruses — a stumbling block for using stem cells in potential medical applications. And that growth system was what scientists term “undefined.” There were variations from batch to batch of mouse cells, and scientists never really knew what the stem cells were coming into contact with and how it might be changing them. The synthetic, chemically-defined, surfaces ended that uncertainty. The approach was inexpensive, simple and a much-needed advance in producing stem cells, Kiessling explained.

With the ability to grow stem cells on the synthetic surfaces under chemically defined, or known, conditions, Kiessling’s group took an additional step in their latest research. It found that chemically defined surfaces can exert control over signaling pathways. “Signaling” is how molecules talk to one another and get things done inside a cell. It’s how an immune cell knows to fight an infection or how a pancreatic cell determines that more insulin is needed in the bloodstream, for example. By controlling how molecules inside a stem cell communicate, researchers could someday in the future nudge them to become one type of cell or tissue over another.

To see whether a new chemically defined surface could change signaling in a pilot experiment, Kiessling tested cancer cells. The research involved use of a signaling substance, transforming growth factor-beta (TGF-beta), which controls a range of activities, from cell growth to self-destruction.

“The new surfaces give scientists much more control over cells, opening up a wide range of possible future applications,” Kiessling explained. Building directly on the results of the pilot study, the surfaces could have applications in wound healing. TGF- beta can help wounds heal, but if it touches healthy skin, inflammation or even a cancerous tumor could develop. “We haven’t done this, but you could imagine a bandage that has a localized concentration of the special peptide surface that would recruit TGF-beta just to the wound site,” said Kiessling.

The surfaces also could make it easier to manufacture organs and tissues in the laboratory someday. “We think that this strategy, with different sets of peptides (building blocks of proteins) bound to the surface, could direct certain human embryonic stem cells on the surface to become one type of cell and other stem cells to become a second cell type, right next to each other. For the tissue engineering involved in growing replacement organs, you need to organize specialized cells in particular ways like this.”

Contacts and sources:
Michael Bernstein
American Chemical Society

Nitrogen's Hidden Health Hazards

Billions of people owe their lives to nitrogen fertilizers — a pillar of the fabled Green Revolution in agriculture that averted global famine in the 20th century — but few are aware that nitrogen pollution from fertilizers and other sources has become a major environmental problem that threatens human health and welfare in multiple ways, a scientist said here today.

“It’s been said that nitrogen pollution is the biggest environmental disaster that nobody has heard of,” Alan Townsend, Ph.D., observed at the 242ndNational Meeting & Exposition of the American Chemical Society (ACS), being held here this week. Townsend, an authority on how human activity has changed the natural cycling of nitrogen to create a friend-turned-foe dilemma, called for greater public awareness of nitrogen pollution and concerted global action to control it. He spoke at a symposium on the topic, which included almost a dozen reports (abstracts of each presentation appear below) by other experts.

“Awareness has grown, but nitrogen pollution remains such a little-recognized environmental problem because it lacks the visibility of other kinds of pollution,” Townsend explained. “People can see an oil slick on the ocean, but hundreds of tons of nitrogen spill invisibly into the soil, water and air every day from farms, smokestacks and automobile tailpipes. But the impact is there — unhealthy air, unsafe drinking water, dead zones in the ocean, degraded ecosystems and implications for climate change. But people don’t see the nitrogen spilling out, so it is difficult to connect the problems to their source.”

The use of nitrogen-based fertilizers, which has doubled in the past century, contributes to a rapidly growing environmental threat.
Credit: iStock

Townsend described the scope and the intensification of the nitrogen pollution problem as “startling.” He noted that nitrogen inputs to the terrestrial environment have doubled worldwide during the past century. This increase is due largely to the invention and widespread use of synthetic fertilizer, which has revolutionized agriculture and boosted the food supply.

The concern focuses on so-called “reactive” nitrogen. Air contains about 78 percent nitrogen. But this nitrogen is unreactive or “inert,” and plants can’t use the gas as a nutrient. In 1909, chemist Fritz Haber developed a way to transform this unreactive gas into ammonia, the active ingredient of synthetic fertilizer. By 2005, human activity was producing about 400 billion pounds of reactive nitrogen each year.

“A single atom of reactive nitrogen can contribute to air pollution, climate change, ecosystem degradation and several human health concerns,” Townsend said. He is an ecology and evolutionary biology professor at the University of Colorado at Boulder. Damage to the ecosystem — a biological community interacting with its nonliving environment — includes water pollution and reduced biological diversity, including the loss of certain plant species.

Though the full extent is currently unknown, nitrogen pollution can impact human health. Reactive nitrogen is a key contributor to air pollution, including the formation of ground-level ozone, which is a well-known health risk. Recent estimates suggest that nitrogen-related air pollution costs the U.S. well over $10 billion per year in both health costs and reduced crop growth. And though less well studied, high nitrogen levels in water can cause a variety of health concerns, ranging from the effects of drinking water nitrate to the potential to alter the risks of several human diseases.

Increased nitrogen levels also have implications for climate change, Townsend noted. Excess nitrogen can affect the rate of climate change in multiple and opposing ways. One the one hand, it leads to more warming via the greenhouse gas nitrous oxide, but on the other hand, it can reduce warming by fueling extra plant growth and by forming substances called reflective aerosols in the atmosphere, the scientists noted.

“The net effect of these processes remains uncertain, but appears to result in minor cooling presently,” Townsend said. However, he noted that excess nitrogen also has large and clear consequences for some worrisome impacts of a changing climate, notably air and water pollution.

“Climate change is expected to worsen each of these problems worldwide, but reduction of nitrogen pollution could go a long way toward lessening such climate-driven risks,” he added.

“We’re just now starting to recognize the scope of the problem,” said Townsend. “But the good news is that there are many opportunities for us to lessen the problems. These include ways in which chemists can help, ranging from the development of new technologies to reduce nitrogen’s impact to new measurement technologies and techniques that can better diagnose the problems we face with nitrogen.”

He outlined several possible solutions to the problem. They include continued and greater support for technologies that remove or reduce reactive nitrogen formation during fossil fuel burning and incentives that can encourage farmers to be more efficient with their fertilizer use. The latter could include subsidies that reward the application of environmental practices that reduce nitrogen levels, he said.

Several other solutions exist for improving the efficiency of agricultural nitrogen use, Townsend added. "In many ways, we already know how to do it —the problems are largely about finding the political and cultural means to implement these new practices," he said.

The National Science Foundation and the David & Lucile Packard Foundationprovided funding for Townsend’s research.

Contacts and sources:
Michael Bernstein
American Chemical Society

Nano-Thermometers Show First Temperature Response Differences Within Living Cells

Using a modern version of open-wide-and-keep-this-under-your-tongue, scientists today reported taking the temperature of individual cells in the human body, and finding for the first time that temperatures inside do not adhere to the familiar 98.6 degree Fahrenheit norm. They presented the research at the 242nd National Meeting & Exposition of the American Chemical Society (ACS), being held here this week.


Researchers are using quantum dots (shown in red) to take the temperature of living cells.
Credit: Haw Yang, Ph.D.


Haw Yang and Liwei Lin, who collaborated on the research, did not use a familiar fever thermometer to check the temperature of cells, the 100 trillion or so microscopic packages of skin, nerve, heart, liver and other material that make up the human body. Cells are so small that almost 60,000 would fit on the head of a common pin. Yang is with Princeton University and Lin is with the University California-Berkeley.

"We used 'nano-thermometers'," Yang explained. "They are quantum dots, semiconductor crystals small enough to go right into an individual cell, where they change color as the temperature changes. We used quantum dots of cadmium and selenium that emit different colors (wavelengths) of light that correspond to temperature, and we can see that as a color change with our instruments."

Yang said that information about the temperatures inside cells is important, but surprisingly lacking among the uncountable terabytes of scientific data available today.

"The inside of a cell is so complicated, and we know very little about it," he pointed out. "When one thinks about chemistry, temperature is one of the most important physical factors that can change in a chemical reaction. So, we really wanted to know more about the chemistry inside a cell, which can tell us more about how the chemistry of life occurs."

Scientists long have suspected that temperatures vary inside individual cells. Yang explained that thousands of biochemical reactions at the basis of life are constantly underway inside cells. Some of those reactions produce energy and heat. But some cells are more active than others, and the unused energy is discharged as heat. Parts of individual cells also may be warmer because they harbor biochemical power plants termed mitochondria for producing energy.

The researchers got that information by inserting the nano-thermometers into mouse cells growing in laboratory dishes. They found temperature differences of a few degrees Fahrenheit between one part of some cells and another, with parts of cells both warmer and cooler than others. Their temperature measurements are not yet accurate enough to give an exact numerical figure. Yang's team also intentionally stimulated cells in ways that boosted the biochemical activity inside cells and observed temperature changes.

Yang says that those temperature changes may have body-wide impacts in determining health and disease. Increases in temperature inside a cell, for instance, may change the way that the genetic material called DNA works, and thus the way that the genes, which are made from DNA, work. Changing the temperature will also change how protein molecular machines operate. At higher temperatures, some proteins may become denatured, shutting down production.

"With these nano thermometer experiments, I believe we are the first to show that the temperature responses inside individual living cells are heterogeneous — or different," said Yang. "This leads us to our next hypothesis, which is that cells may use differences in temperature as a way to communicate."

Yang's team is now conducting experiments to determine what regulates the temperature inside individual cells. One goal is to apply the information in improving prevention, diagnosis and treatment of diseases.

Contacts and sources:
Michael Bernstein
American Chemical Society

Research From Everest: Can Leucine Help Burn Fat And Spare Muscle Tissue During Exercise

Research on Mt. Everest climbers is adding to the evidence that an amino acid called leucine — found in foods, dietary supplements, energy bars and other products — may help people burn fat during periods of food restriction, such as climbing at high altitude, while keeping their muscle tissue. It was one of two studies reported here today at the 242nd National Meeting & Exposition of the American Chemical Society (ACS) on the elite corps of men and women who have tackled the highest peak on Earth, mountaineering’s greatest challenge.

In a pilot study of the feasibility of supplementing the diet of climbers with the branch chain amino acid, leucine, scientists studied 10 climbers for 6-8 weeks as they ascended Mt. Everest, which towers 29,000 feet above sea level. Since Sir Edmund Hillary and Sherpa guide Tenzing Norgay made the first successful climb in 1953, over 2,500 people have scaled Mt. Everest in the Himalayas. Thousands more tried and failed, with more than 216 deaths. The researchers were studying the physiological benefits of adding leucine to the climbers’ diets to help them stay healthy. The researchers are from the University of Utah.

Wayne Askew, Ph.D., and his co-investigator, Stacie Wing-Gaia, Ph.D., who headed the leucine study, explained that the extreme weather conditions, low oxygen levels, treacherous terrain and strenuous exercise during such climbs create a huge nutritional challenge. Weight loss at high altitude is exactly the opposite problem that is on the minds of millions of people in the United States and other countries who are trying to shed excess weight. Climbers often cannot or do not eat enough calories, failing to replenish their bodies with important nutrients. They lose both fat and muscle during an arduous climb, endangering their strength and motor coordination. At high altitudes, fat and muscle loss occurs not only when they are climbing, but also at rest.

Two nutritional strategies could help high-altitude climbers stay strong and healthy.
Credit: iStock

“The significant part about this weight loss is that a disproportionate amount comes from the muscle mass,” said Askew. “This can be a problem on long expeditions at high altitude because the longer climbers are there and the higher they go, the weaker they get. The body breaks down the muscle for energy, so climbers don’t have it available for moving up the mountain.

“We knew that leucine has been shown to help people on very low-calorie, or so-called ‘calorie-restricted diets’, stay healthy at sea level,” said Askew. “It’s one of the components, the building blocks, of protein. But no one had tested whether leucine would help people stay healthy and strong at high altitudes, so we added leucine to specially prepared food bars that we gave to the climbers.”

Askew didn’t climb Mt. Everest, but members of his research team, Dr. Wing-Gaia and Dr. Rodway, went to base camp and measured expedition members’ fat and muscle by using an ultrasound device placed on the skin. They are currently examining the data to see whether climbers who ate the leucine bar retained more muscle than those who ate a bar without leucine. One finding that was apparent early on in the study was that the food item in which the leucine was delivered was critically important. The Everest climbers had difficulties consuming the three food bars per day that contained the additional leucine. 

Askew stressed that this was a small pilot study to test the feasibility of leucine supplementation at altitude, so definitive conclusions of its benefits at altitude await the results of a more controlled clinical study. The researchers plan to improve the palatability of the leucine food vehicle in consultation with military food product developers at Natick Research Development and Engineering Center and conduct a more controlled study at high altitude, possibly with the U.S. Army Institute of Environmental Medicine at their laboratory on Pike’s Peak.

Askew pointed out that the findings also could help people at lower altitudes who want to lose weight while preserving their lean body mass, or who are elderly and don’t eat or exercise enough to maintain their strength. He predicts that consumers might one day see leucine-rich bars on grocery store shelves, especially at high-altitude locations, such as Aspen and Denver, where high-altitude skiing and climbing activities are popular.

In the other Everest report, John Finley, Ph.D., described a study in which he gave Mt. Everest climbers a type of fat called “medium-chain triglycerides” in their cookies and hot chocolate. They also took an aspirin every day.

“We tried to improve climbers’ performances by feeding them medium-chain triglycerides — fat that we thought would be metabolized better as quick energy,” said Finley, who is with Louisiana State University.

At high altitudes, the air pressure is low and the oxygen is less dense — making less oxygen available for breathing. In response, the body makes more oxygen-carrying red blood cells. This thickens the blood and puts a strain on the heart and lungs, increasing the risk of potentially dangerous blood clots. That’s why Finley also had the climbers take aspirin, which is known for thinning the blood and reducing the risks of having a heart attack or stroke. “We found that we could reduce the risk factors involved in having more viscous blood at high altitudes by giving the climbers aspirin,” he said.

Finley himself went on the climb and collected urine and fecal samples. The climbers who consumed the medium-chain triglycerides lost less weight and performed better than others on the expedition. The data also suggested that fats aren’t absorbed well at high altitudes when the body is losing a lot of weight, possibly because too little bile is produced by the liver to dissolve the fats, he explained.

Finley doesn’t have plans to commercialize the medium-chain triglyceride hot chocolate and cookies, but suggests that people going to high-altitude locations talk with their health-care providers about taking a daily aspirin.

Contacts and sources:
Michael Bernstein
American Chemical Society

Food For Mars: Stocking The Pantry For A Trip To The Red Planet

A green thumb and a little flair as a gourmet chef may be among the key skills for the first men and women who travel to the Red Planet later this century, according to a scientist who reported here today on preparations for the first manned missions to Mars.

Speaking at the 242nd National Meeting & Exposition of the American Chemical Society (ACS), Maya R. Cooper said that provisioning the astronauts with food stands as one of the greatest challenges in scripting the first manned mission to Mars. ACS, the world largest scientific society, opened the meeting today at the Colorado Convention Center and downtown hotels. With more than 7,500 reports on new advances in science and some 9,500 scientists and others expected in attendance, it will be one of 2011’s largest scientific gatherings.

Cooper explained that the challenges of provisioning space vehicles and Martian surface bases begin with tangible factors, such weight and nutrition, and encompass psychological nuances, such as providing a varied, tasty menu that wards off boredom. The solutions envisioned now include requiring astronauts to grow some of their own food and engage in much more food preparation than their counterparts on the International Space Station.

Astronauts en route to Mars may not have it as easy as this space shuttle astronaut — they may
have to grow their own food.
Credit: NASA Johnson Space Center (NASA-JSC)

The major challenge is to balance weight, food acceptability and resource utilization, Cooper explained. She is a senior research scientist at the NASA Johnson Space Center in the Space Food Systems Laboratory in Houston, Texas. For flights on the space shuttles and the International Space Station, astronauts get 3.8 pounds of food per day. For a 5-year round-trip mission to Mars, that would mean almost 7,000 pounds of food per person.

“That’s a clear impediment to a lot of mission scenarios,” Cooper said. “We need new approaches. Right now, we are looking at the possibility of implementing a bioregenerative system that would involve growing crops in space and possibly shipping some bulk commodities to a Mars habitat as well. This scenario involves much more food processing and meal preparation than the current food system developed for the space shuttles and the International Space Station.”

Bioregenerative systems involve growing plants that multi-task. They would supply food, of course. But just as plants do in natural environments on Earth, those growing in bioregenerative systems also would release oxygen for the astronauts to breathe, purify the air by removing the carbon dioxide that crews exhale and even purify water.

Ideally, these plants would have few inedible parts, would grow well with minimal tending and would not take up much room. Ten crops that fit those requirements have emerged as prime candidates for the Mars mission’s kitchen garden. They are lettuce, spinach, carrots, tomatoes, green onions, radishes, bell peppers, strawberries, fresh herbs and cabbages.

Cooper cited another option for these missions, the first of which could launch in the 2030s, according to some forecasts. Shipping bulk commodities to Mars could involve unmanned spacecraft launched a year or two before the astronauts depart to establish stashes of food with long shelf-lives that the crew could use while exploring the Red Planet.

Engaging astronauts in food production and preparation is the latest concept in a 50-year evolution of technology for filling astronauts’ and cosmonauts’ larders, Cooper noted. It began when Yuri Gagarin reportedly munched on paté and caviar during that first manned spaceflight in 1961.

Space food has come a long way since the days of freeze-dried food blocks and squeezing gooey foods out of toothpaste tubes that astronauts ate in the earliest days of space flight. By the late 1960s, astronauts for the first time could have hot food and eat their food with a spoon in a special bowl. Other utensils were introduced in the 1970s with Skylab — the U.S.’ first space station. These astronauts could choose from 72 different foods, some of which were stored in an on-board refrigerator or freezer — a first for space cuisine. In recent years, space shuttle astronauts could drink a coffee with their scrambled eggs for breakfast, snack on chocolates or a brownie and choose from chicken al a King, mushroom soup or rice pilaf among other foods for lunch and dinner — just like on Earth. These prepackaged foods take only a few minutes and little effort to prepare.

“The NASA Advanced Food Technology project is currently working to address the issues of food variety, weight, volume, nutrition and trash disposal through research and external academic and commercial collaborations,” Cooper noted.

Contacts and sources:
Michael Bernstein
American Chemical Society

Mysteries About Carbon, Possible Oil Formation And More Deep Inside Earth

How do diamonds the size of potatoes shoot up at 40 miles per hour from their birthplace 100 miles below Earth's surface? Does a secret realm of life exist inside the Earth? Is there more oil and natural gas than anyone dreams, with oil forming not from the remains of ancient fossilized plants and animals near the surface, but naturally deep, deep down there? Can the greenhouse gas, carbon dioxide, be transformed into a pure solid mineral?

Those are among the mysteries being tackled in a real-life version of the science fiction classic, A Journey to the Center of the Earth, that was among the topics of a presentation here today at the 242nd National Meeting & Exposition of the American Chemical Society (ACS). Russell Hemley, Ph.D., said that hundreds of scientists will work together on an international project, called the Deep Carbon Observatory (DCO), to probe the chemical element that's in the news more often than perhaps any other. That's carbon as in carbon dioxide.

"Concerns about climate change have made millions of people aware of carbon's role on the surface of the Earth, in the atmosphere and in the oceans," Hemley said. "The Deep Carbon Observatory will uncover critical information about the movement and fate of carbon hundreds and thousands of miles below Earth's surface. We call that the deep carbon cycle."

Hemley said this basic research could have practical implications in the future. Using laboratory equipment that reproduces pressures deep within the Earth, which are thousands to millions of times higher than on the surface, scientists in these labs have discovered a way to convert carbon dioxide into a rock-like material called polymeric carbon dioxide. With further refinements, scientists could enhance its stability closer to the Earth's surface.

The findings also may lead to new materials for commercial and industrial products. Hemley's laboratory, for instance, has developed a way to produce "super" diamonds, or high-quality diamonds that are bigger and better than existing ones. Natural diamonds form slowly under the high-pressure, high-temperature conditions that exist deep within the Earth, while today's synthetic diamonds form under similar conditions in the laboratory. Using a process called chemical vapor deposition, Hemley's research group made diamonds rapidly and at low pressure. The new diamonds have superior qualities, including extreme hardness, improved transparency and better electrical and temperature properties. The diamonds could lead to improved computer chips that run faster and generate less heat than existing silicon chips, Hemley said. They also show promise for use in advanced cutting-tools, more durable and heat-resistant windows for spacecraft and other applications, he noted.

The DCO project will probe the big mystery about the formation of natural diamonds, including their chemical composition and how they shoot up quickly from deep within the Earth. Scientists can't directly observe that process at present, as there's no practical way to travel down 100 miles beneath the surface of the planet. Observations are limited to laboratory simulations of this process for now, said Hemley, who is director of the Geophysical Laboratory at the Carnegie Institution of Washington in Washington, D.C. His laboratory specializes in the chemistry and physics of materials under extreme conditions. Hemley's presentation at the ACS meeting, entitled "Chemistry of Planetary Gases, Liquids, and Ices in Extreme Environments," focused on what happens to planetary material under conditions of extreme pressure and temperature, as well as other insights relevant to Earth.

Another area that the DCO will explore is energy. The extent to which hydrocarbons in the Earth form from inorganic processes deep within the Earth rather than only from the fossilized remains of plants and animals remains an important unanswered question. Exploring the nature of carbon deep within the Earth may provide clues on how and to what extent this abiotic process might contribute to energy reserves, Hemley said.

Finally, DCO research has implications in the search for other life forms on Earth and even outer space. Scientists have already identified microbes at about a mile or so deep within the Earth under high temperatures. They suspect that some forms may exist at even deeper levels.

Past studies suggest that bacteria and other life forms can't survive beyond several thousand atmospheres of pressure. But new studies by scientists in Hemley's lab show that some bacteria are capable of surviving pressures of up to 20,000 atmospheres. That supports the theory that life might exist in extreme extraterrestrial environments, Hemley noted.

Contacts and sources:
Michael Bernstein
American Chemical Society

The First Nuclear Power Plants For Settlements On The Moon And Mars

The first nuclear power plant being considered for production of electricity for manned or unmanned bases on the Moon, Mars and other planets may really look like it came from outer space, according to a leader of the project who spoke here today at the 242nd National Meeting & Exposition of the American Chemical Society (ACS).

James E. Werner said that innovative fission technology for surface power applications is far different from the familiar terrestrial nuclear power stations, which sprawl over huge tracts of land and have large structures such as cooling towers.

"People would never recognize the fission power system as a nuclear power reactor," said Werner. "The reactor itself may be about 1 ½ feet wide by 2 ½ feet high, about the size of a carry-on suitcase. There are no cooling towers. A fission power system is a compact, reliable, safe system that may be critical to the establishment of outposts or habitats on other planets. Fission power technology can be applied on Earth's Moon, on Mars, or wherever NASA sees the need for continuous power."

The team is scheduled to build a technology demonstration unit in 2012. This is a cooperative project between the National Aeronautics and Space Administration (NASA) and the U.S. Department of Energy (DOE). Werner leads the DOE's Idaho National Laboratory involvement in this effort, which includes participation in the reactor design and modeling teams, fuel development and fabrication and development of a small electrical pump for the liquid metal cooled system.

Sunlight and fuel cells were the mainstays for generating electricity for space missions in the past, but engineers realized that solar energy has limitations. Solar cells do a great job supplying electricity in near-Earth orbits and for satellite-borne equipment, but nuclear power offers some unique capabilities that could support manned outposts on other planets or moons.

"The biggest difference between solar and nuclear reactors is that nuclear reactors can produce power in any environment," Werner explained. "Fission power technology doesn't rely on sunlight, making it able to produce large, steady amounts of power at night or in harsh environments like those found on the Moon or Mars. A fission power system on the Moon could generate 40 kilowatts or more of electric power, approximately the same amount of energy needed to power eight houses on Earth." In addition, he said that a fission power system could operate in a variety of locations such as in craters, canyons or caves.

"The main point is that nuclear power has the ability to provide a power-rich environment to the astronauts or science packages anywhere in our solar system and that this technology is mature, affordable and safe to use," Werner said.

Fission power systems rely on energy generated from nuclear fission. Nuclear fission works by splitting uranium atoms to generate heat that is then converted into electric power. The primary components of a fission power system are similar to those found in the commercial reactors currently in use: a heat source, power conversion, heat rejection and power conditioning and distribution.

Werner added that despite the similarities in components, fission power systems for space applications feature a number of differences compared with commercial reactors.

"While the physics are the same, the low power levels, control of the reactor and the material used for neutron reflection back into the core are completely different," Werner said. "Weight is also a significant factor that must be minimized in a space reactor that is not considered in a commercial reactor."

Werner contends that once the technology is developed and validated, it may prove to be one of the most affordable and versatile options for providing long-term base power for the space exploration programs.


Contacts and sources:
Michael Bernstein
American Chemical Society

Friday, August 26, 2011

Single Vaccine Protects Against Rabies And Ebola Virus

Researchers from Thomas Jefferson University, among other institutions, including the National Institute of Allergy and Infectious Diseases, have developed single vaccines to protect against both rabies and the Ebola virus.

Successfully tested in mice, these bivalent vaccines have several advantages over other Ebola candidates that could help speed up development for use in humans and primates. It's built on the same platform as the already approved and financially viable rabies vaccine, and it protects at-risk populations against two viruses, not just one, making it an effective and ideal public health tool.

"Many Ebola vaccine candidates have been proven effective, but none are close to licensure," said Matthias Schnell, Ph.D., director of the Jefferson Vaccine Center. "One of the challenges is the market: There's rather limited incentive in creating a vaccine for Ebola. But these vaccines could change that."

The findings were published ahead of print online August 17 in the Journal of Virology.

The Ebola virus belongs to the Filoviridae family and is comprised of five distinct species. The Zaïre, Sudan and Bundibugyo species have been associated with large Ebola hemorrhagic fever outbreaks in Africa. According to the World Health Organization, more than a thousand people have died from the virus since it was discovered in 1976.

"Rabies still poses a health threat for people worldwide, and is especially devastating in developing nations where a post exposure treatment is often not available. And Ebola still exists in parts of Central Africa and is also a chief bioterrorism concern worldwide," said Dr. Schnell, who is also a Professor in the Department of Microbiology and Immunology at Thomas Jefferson University. "You can protect these people from two very lethal diseases in an area where they don't have the best access to medical care."

The purpose of this study was to identify novel vaccine candidates for Ebola with a maximum potential of licensure and utilization.

Researchers generated a chemically inactivated and live rabies virus expressing the Ebola Zaïre species glycoprotein using a reverse genetics system based on the commonly-used rabies vaccine. Immunizations with those vaccines, the researchers found, induced immunity against each virus and conferred protection from both viruses in mice.

Piggy backing, in a sense, on the rabies vaccine could accelerate development of vaccines that protects against Ebola because of the advanced state of the rabies vaccine's safety, production and distribution, according to Schnell.

"After the vaccine has been tested in primates and eventually humans, this new vaccine could kill the proverbially two birds with one stone," he said.

There are implications for nonhumans, too—gorillas, in particular. The Ebola virus has eradicated thousands of gorillas, prompting the World Conservation Union to raise their status to "critically endangered" in 2007, the first time a mammal has become critically endangered as a direct result of disease. Vaccinations, though challenging, could stall those deaths.

What's more, several human outbreaks have been attributed to primate interaction or handling, so providing a vaccine for our closest relative could minimize that risk.

Contacts and sources:
Steve Graff
Thomas Jefferson University

Study Sheds Light On Stem Cell Role In Regenerating Fingers, Toes

Tissue-specific adult stem cells are responsible for the ability of mammals to re-grow the tips of fingers or toes lost to trauma or surgery, say researchers at the Stanford University School of Medicine. The finding discredits a popular theory that holds that previously specialized cells regress, or dedifferentiate, in response to injury to form a pluripotent repair structure called a blastema.

“We’ve shown conclusively that what was thought to be a blastema is instead simply resident stem cells that are already committed to become specific tissue types,” said Irving Weissman, MD, director of Stanford’s Institute for Stem Cell Biology and Regenerative Medicine. “The controversy about limb regeneration in mammals should be over.”

The research is particularly meaningful because some scientists and national media reports have championed the idea that money allotted by the California Institute for Regenerative Medicine for stem cell studies would have been better funneled to blastema research, Weissman said.

Weissman, who is also the Virginia & D.K. Ludwig Professor for Clinical Investigation in Cancer Research and a member of Stanford’s Cancer Institute, is the senior author of the study, published Aug. 24 in Nature

Although it’s not well-known, mice and even some humans can re-grow finger or toe tips that have been lost in accidents. But, unlike salamanders or newts, their ability is limited to the repair of relatively minor damage. “While lower vertebrates can regenerate an entire limb within a matter of weeks, mice and humans have maintained only a vestige of this ability,” said Rinkevich. “The re-growth of amputated digit tips — a few millimeters in mice and up to the first joint in humans — is the only documented case of limb regeneration in mammals. We wanted to understand the basic mechanism of how this happens.”

Unlike salamanders, mice offered a genetically well-documented animal model with which to study limb regeneration. Specifically, Rinkevich, Weissman and their colleagues have shown that damage to a digit tip is repaired by specialized adult stem cells that spend their lives quietly nestled in each tissue type. Like master craftsmen, these cells spring into action at the first sign of damage, working independently yet side-by-side to regenerate bone, skin, tendon, vessels and nerves. But just as you wouldn’t ask a mason to wire your house, or an electrician to put on a new roof, the division of labor among these stem cells is strict. Each is responsible solely for its own tissue type.

In contrast, the blastema theory invokes a new pluripotent cell type formed out of urgency from previously specialized cells. This jack-of-all-trades cell discards its former profession and instead jumps in to indiscriminately regenerate all the tissue types of the limb.

A German group headed by stem cell scientist Elly Tanaka, PhD, published similar results in salamanders in 2009, but it was unclear whether the findings would hold true in mammals.

“This finding changes the current dogma of limb regeneration, from pluripotent blastema cells to tissue-specific stem and progenitor cells,” said Rinkevich.

Limb regeneration is governed by the action of tissue-specific adult stem cells. Here, a mouse has been engineered to have cells that express only one of four possible colors: red, green, yellow or blue. As the tip of an amputated digit re-grows, strict separations between the contributions of individual cells are apparent as distinct bands of color.
 
Credit: Yuval Rinkevich

For this study, Rinkevich used genetics to label specific tissue types in the mice with distinctive fluorescent colors that are easily seen through a microscope. He then surgically removed a small (a few millimeters) portion of the animals’ toe to mimic a naturally occurring amputation injury and waited for the tip to re-grow. (The animals were anesthetized during the procedure and were given analgesics after the procedure to relieve pain.)

After three months, Rinkevich and his colleagues examined the regenerated tissue.

“We found that each tissue type could only give rise to that type of tissue,” he said. “There was no cross contribution between tissue types or germ layers.” In other words, there were clear demarcations between areas of color that corresponded to structures such as the epidermis, tendon, nail, vessels, nerves and bone.

“I was extremely surprised,” said Rinkevich. “I began the experiment very eager to find something like a dedifferentiation or transdifferentiation phenomenon — that is, one tissue type becoming another. But this is clearly not the case.”

In addition to the blastema theory, there was one other possibility. Some researchers had suggested that stem cells circulating in the blood could contribute to this type of regeneration. To assess this possibility, Rinkevich connected the circulatory systems of two mice. One mouse was genetically bred to express a colorful marker in all its cells; the other had its toe tip removed. They found that the labeled cells did not contribute to the regenerated tissue, showing that circulating stem cells were unlikely to be involved in the regrowth of the limb.

The researchers work doesn’t discredit previous work by researchers at Stanford and elsewhere showing that it is possible using transferred genes to coax adult, specialized cells (such as those found in the skin) to become other types of cells, such as neurons. That line of study is still very important to the possible development of future therapies and the generation of cell lines for research, they say. However, the approach in the new study has some particular advantages.

“Here we are characterizing and learning about a naturally occurring regeneration phenomenon without adding other genes,” said Rinkevich. “That’s our strong point. We want to first understand how normal tissue regeneration works. Then we can try to exploit that knowledge to perhaps enhance the growth of digits or limbs in humans.”

In addition to Rinkevich and Weissman, other Stanford researchers involved in the study include research assistant Paul Lindau, postdoctoral scholar Hiroo Ueno, PhD, and professor of surgeryMichael Longaker, MD.

The research was supported by the California Institute of Regenerative Medicine, the Smith Family Trust, the Oak Foundation, the Hagey Laboratory for Pediatric Regenerative Medicine, the

Contacts and sources:
By Krista Conger
Stanford University

Sex With Neanderthals Boosted Immune System Of Modern Humans

For a few years now, scientists have known that humans and their evolutionary cousins had some casual flings, but now it appears that these liaisons led to a more meaningful relationship.

Laurent Abi-Rached, Paul Norman and Libby Guethlein are co-authors of research on how the genome of geographically-distinct human populations vary in the amount and type of immune-system genes inherited from evolutionary cousins, the Neanderthals and Denisovans. People in Papua New Guinea, for instance, have a particularly high percentage of one type of immune-system gene that is rarely found in people in Africa.
description of photo
Credit: Stanford University/

Sex with Neanderthals and another close relative — the recently discovered Denisovans — has endowed some human gene pools with beneficial versions of immune system genes, report researchers at the Stanford University School of Medicine in an article published online Aug. 25 inScience Express.

Although modern humans, Neanderthals and Denisovans share a common ancestor in Africa, the groups split into separate, distinct populations approximately 400,000 years ago. The Neanderthal lineage migrated northwestward into West Asia and Europe, and the Denisovan lineage moved northeastward into East Asia. The ancestors of modern man stayed in Africa until 65,000 years or so ago, when they expanded into Eurasia and then encountered the other human-like groups. In some cases, the rendezvous were amorous in nature.

Last year, a partial genome sequence of Neanderthals, who died out approximately 30,000 years ago, revealed that these trysts left as much as 4 percent Neanderthal DNA in the genetic blueprint of some present-day humans. Last December, the genome of another human cousin, the extinct Denisovans, made clear that up to 6 percent of some people's genomes are Denisovan in origin.

Peter Parham
Credit: Stanford University

Now, a team of researchers led by Peter Parham, PhD, professor of structural biology and of microbiology and immunology, has found that these matings had a positive effect on modern human fitness. "The cross breeding wasn’t just a random event that happened, it gave something useful to the gene pool of the modern human," said Parham, who is senior author of the study.

The useful gift was the introduction of new variants of immune system genes called the HLA class-1 genes, which are critical for our body's ability to recognize and destroy pathogens. HLA genes are some of the most variable and adaptable genes in our genome, in part because the rapid evolution of viruses demands flexibility on the part of our immune system.

"The HLA gene system, with its diversity of variants, is like a magnifying glass," said lead author Laurent Abi-Rached, PhD, explaining that it provides a lot more detail about the history of populations than typical gene families. Abi-Rached is a research associate in the Parham lab.

Prior to the sequencing of the Neanderthal and Denisovan genomes, Parham and his group had suspected that at least one HLA variant came from archaic humans. They determined that the variant known as HLA-B*73 is rare in present-day African populations but occurs with significant frequency in West Asian populations. The ethnic distribution of HLA-B*73 and its similarity across populations suggested that it came from a relatively recent co-mingling of modern human and archaic human DNA, which most likely would have happened outside of Africa. Parham's team wanted to discern which archaic humans were the source of the HLA-B*73 gene type. In the last year they have found the answer in the genome sequence of a recently discovered human relative, the Denisovans, whose existence first came to light in 2008 with the discovery of an unfamiliar finger bone and tooth in a cave in Siberia.

By comparing the HLA genes of the archaic humans with modern humans, the researchers were able to show that the HLA-B*73 allele likely came from cross breeding with Denisovans. Little is known about what the Denisovans looked like (the finger bone and the tooth are the only known fossils), but the genome sequence extracted from the finger bone gives insight into where they overlapped with modern humans. Gene flow from the Denisovans into modern humans has left the highest frequency of the HLA-B*73 allele in populations in West Asia, the most likely site for the fortuitous mating to have taken place.

Even in West Asian populations, the HLA-B*73 variant never represents more than 5 percent of all known variants of that gene. However, other human HLA types that arose from ancient matings are found in much greater frequencies. "Certain traits coming from these archaic humans have become the dominant form," said Parham. For example, another HLA gene type, called HLA-A*11, is absent from African populations, but represents up to 64 percent of variants in East Asia and Oceania, with the greatest frequency in people from Papua New Guinea. "The likely interpretation was that these HLA class variants provided an advantage to modern human and so rose to high frequencies."

A similar scenario is seen in some HLA gene types found in the Neanderthal genome, which was also sequenced from DNA extracted from ancient bones. These gene variants are common in European and Asian populations but rare in African populations. "We are finding frequencies in Asia and Europe that are far greater than whole-genome estimates of archaic DNA in modern human genomes, which is 1 to 6 percent," said Parham. Within one class of HLA gene, the researchers estimate that Europeans owe half of their variants to interbreeding with Neanderthals and Denisovans, Asians owe up to 80 percent and Papua New Guineans, up to 95 percent.

"This is not the pattern seen genomewide," said Abi-Rached. "The HLA system is unique in its diversity and the strength of natural selection acting on it, but it's possible that other gene systems, particularly the ones under similar pressure for variation, could show a similar pattern."

Other Stanford-affiliated authors include Matthew Jobin, PhD, lecturer in the Department of Anthropology; postdoctoral scholar Subhash Kulkarni, PhD; research assistant Farbod Babrzadeh; visiting scholar Baback Gharizadeh, PhD; and research associates Lisbeth Guethlein, PhD, and Paul Norman, PhD. The Stanford researchers collaborated with colleagues at the Anthony Nolan Research Institute in the United Kingdom; Ankara University in Turkey; theNational Marrow Donor Program in Minneapolis; the University of Manitoba; the University of Nairobi; the National Cancer Institute; Liverpool University; UCLA; Canadian Blood Services; andUC-Santa Cruz.

The study was funded by National Institutes of Health, the Yerkes Center, the National Science Foundation and the National Cancer Institute.

Information about the departments of Structural Biology and of Microbiology and Immunology, which also supported the work, is available at http://microimmuno.stanford.edu/ andhttp://structuralbio.stanford.edu/.

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By Susan L. Young

Narcolepsy Caused By Flu? Scientists Link The Two

The onset of narcolepsy appears to follow seasonal patterns of H1N1 and other upper airway infections, according to a new study of patients in China that was led by Stanford University School of Medicine narcolepsy expert Emmanuel Mignot, MD.

The findings, published online Aug. 22 in Annals of Neurology, a journal of the American Neurological Association and Child Neurology Society, show that a peak in narcolepsy cases occurred five to seven months after a peak in flu/cold or H1N1 infections in the country.

“Together with recent findings, these results strongly suggest that winter airway infections such as influenza A (including H1N1), and/or Streptococcus pyogenes are triggers for narcolepsy,” Mignot, a professor of psychiatry and behavioral sciences, and his colleagues wrote in the paper.

The study follows recent reports that a particular H1N1 vaccine, not one used in the United States or China, seemed to lead to narcolepsy. This new paper, however, found no correlation between vaccination and narcolepsy among the patients studied in China. “The new finding of an association with infection, and not vaccination, is important as it suggests that limiting vaccination because of a fear of narcolepsy could actually increase overall risk,” the authors wrote.

Approximately 3 million people worldwide suffer from narcolepsy, a neurological disease that is characterized by daytime drowsiness, irregular sleep at night and cataplexy — a sudden loss of muscle tone and strength. In 2009 Mignot and colleagues confirmed scientists’ long-held suspicion that narcolepsy is an autoimmune disease, caused when patients’ immune systems kill the neurons that produce the protein hypocretin.

Experts believe that a person has a genetic predisposition to the disease, and some environmental factor kicks his or her immune system into action leading to narcolepsy. As noted in the paper, past studies have shown that Streptococcus pyogenes infections, such as strep throat, have preceded the onset of narcolepsy in Caucasians, suggesting a role for upper airway infections in triggering the disease, Mignot said.

Last year, several European countries reported new cases of narcolepsy in children who had been vaccinated for the H1N1 strain of influenza; children who received the Pandemrix H1N1 vaccine in Finland, for example, faced a ninefold increased risk of narcolepsy. The World Health Organization led an investigation and determined that something about this particular vaccine acted in a “joint effort” with “some other, still unknown factor” to increase risk in those already genetically predisposed. (Pandemrix contains two adjuvants to invoke a stronger immune response; these additives are not included in the H1N1 vaccines used in the United States and China.)

For the new study, the researchers looked at the data of 906 patients who were diagnosed with narcolepsy in Beijing between September 1998 and February 2011, and determined the patients’ month of onset of cataplexy and sleepiness. They conducted brief phone interviews with 154 patients whose narcolepsy appeared after October 2009, the date of the first H1N1 vaccination administered in China. The researchers also queried the patients about their history of seasonal flu, H1N1 vaccinations and other diseases.

Mignot’s group found that the occurrence of narcolepsy onset was seasonal and significantly influenced by month. Onset was least frequent in November and most frequent in April; there was a five- to seven-month delay between the seasonal peak in flu/cold or H1N1 infections and the peak in narcolepsy onset occurrences.

The paper doesn’t show cause and effect, but it does show a strong correlation between narcolepsy onset and this seasonal pattern.

The team also found a threefold increase in disease onset following the 2009-10 H1N1 winter flu pandemic compared with other years.

Only a small amount — 5.6 percent — of the patients interviewed recalled receiving an H1N1 vaccine. The onset, the researchers concluded, is unlikely to be explained by vaccinations. Instead, as they wrote in the paper, these winter infections appear to “initiate or reactivate an immune response that leads to hypocretin cell loss and narcolepsy in genetically susceptible individuals.”

Mignot said the work is exciting because it provides insight on how the disease is triggered. “We’re much closer to understanding what’s happening in the autoimmune destruction of hypocretin cells,” he explained.

From a public-health standpoint, Mignot said the work suggests that getting vaccinated and avoiding influenza may provide a protective benefit to patients. He said, “It’s very possible that being vaccinated with a mild vaccine, one without the adjuvants in question, blocks you from getting a big infection that could increase your risk of narcolepsy.”

As for the differences between the findings of the study and what has been observed in Europe, Mignot said it’s possible that the strong immune response prompted by the Pandemrix vaccine increases the risk of narcolepsy. He emphasized, however, that more study is needed and that people shouldn’t avoid getting vaccinated.

“Even with Pandemrix, it’s still a very small risk — and there’s a bigger risk from dying of an infection if you don’t get vaccinated,” he said.

Fang Han, MD, with the Beijing University People's Hospital, is the first author of the study. Mignot’s Stanford co-authors include research associate Ling Lin, MD, PhD; postdoctoral scholar Simon Warby, PhD; and senior research scientist Juliette Faraco, PhD.

This study was funded by the National Natural Science Foundation of China, the Sino-German Center for Research Promotion, the Beijing Municipal Science & Technology Commission and the National Institutes of Health. Information about Stanford’s Department of Psychiatry and Behavioral Sciences, which also supported this study, is available athttp://psychiatry.stanford.edu/.

Mignot is now in discussion with GlaxoSmithKline, the maker of Pandemrix, about funding new research on the vaccine.

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Stanford University